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Method for comparing and aligning protein sequences, by analysing patterns of the two-dimensional (2D) representation

=== Oxazolidinone-based cholesterol esterase transfer protein (CETP) inhibitors ===

...er of the class, which inhibit [[amino alkyl transfer RNA]] binding during protein synthesis

...charged, polar amino acids and it is typically found on the surface of a [[protein structure]]. It is one of only three positively charged amino acids, the o

A catecholamine plasma membrane transport protein that is a sodium chloride-dependent neurotransmitter symporter located prim

...t translates the genetic code and synthesizes amino acids into the correct protein sequence.

(Growth hormone secretagogue receptor); a G-protein coupled receptor, densely expressed in appetite-regulating regions of the [

A [[G-protein-coupled receptor]] of the [[purinergic P2 receptor]] type, through which bi

The transfer of information in the genetic code to synthesize a protein from amino acids; mediated by a [[ribosome]] translating codons in an mRNA

...throblast]]s, [[macrophage]]s, [[hepatocyte]]s and various kidney cells, a protein that transfers divalent metal ions including [[iron]] (Fe²⁺), [

*[[Affinity (biology)]] - in biochemistry, protein-ligand binding

...pular with troops in that it gave strong flavor as well as a great deal of protein, and also would not spoil when packed

{{r|Protein structure}} {{r|Protein}}

Chimeric monoclonal antibody against the protein CD20, which is primarily found on the surface of B cells, and used in the t

{{r|Protein structure}} {{r|Protein}}

44-kDa highly glycosylated plasma protein that binds phospholipids including cardiolipin; apolipoprotein E receptor;

...enzyme Ribulose 1,5-bisphosphate carboxylase/oxygenase; the most abundant protein on earth and required for the first step of the Calvin cycle to reduce carb

{{r|Protein}} {{r|Protein kinase||**}}

...tant role in phosphorylating and regulating the activity of a variety of G protein-coupled receptors."<ref>{{OMIM|600870}}</ref> ...see [http://www.ncbi.nlm.nih.gov/books/bv.fcgi?highlight=receptor,kinase,G-protein-coupled&rid=mcb.figgrp.5742 figure]).<ref name="isbn0-7167-3136-3">{{cite b

...hort), is a [[gene]] of about 45[[kilo|k]][[Dalton|Da]] that encodes the [[protein]] [[LIS1]] which is involved in [[lissencephaly]] in humans.

...h gene in the DNA molecule carries the information needed to construct one protein, which, acting as an enzyme, controls one chemical reaction in the cell.

...herical rather than the normal flattened disc, due to an incorrect surface protein that will cause the cells to be destroyed in the [[spleen]]

...ytoskeleton]]. The primary structural component of a microfilament is a [[protein]] called [[actin]].

* {{search link|"X-Box" -gene -protein|X-Box|ns0|ns14|ns100}} (Xbox)

...f enzymes that catalyze the conversion of [[adenosine triphosphate]] and a protein to [[adenosine diphosphate]] and a [[phosphoprotein]].

Iron-containing allosteric protein in erythrocytes of vertebrates, consisting of about 6 percent heme and 94 p

In [[biology]], '''recombinant proteins''' are "[[protein]]s prepared by [[recombinant DNA]] technology."<ref>{{MeSH|Recombinant prot

...identity is as low as 7 %. This representation is obtained by writing the protein sequence on a classical [[alpha helix]] (3.6 amino acids per turn) smoothed ...Poupon A, Canard L, Chomilier J, Henrissat B, Mornon JP (1997) Deciphering protein sequence information through hydrophobic cluster analysis (HCA): current st

....rcsb.org/pdb/molecules/pdb50_1.html The Glycolytic enzymes in Glycolysis: Protein Data Bank]

...and member of the family of Picornaviridae, composed of a RNA genome and a protein capsid, and a causative agent of poliomyelitis.

The sulfosalicylic acid (SSA) test measures all protein. ===Spot protein/creatinine ratio===

Morimoto T ''et al.'' (2008) Enhanced recombinant protein productivity by genome reduction in Bacillus subtilis. ''DNA Research'' [ht ...lus subtilis spore-based vaccine expressing Clonorchis sinensis tegumental protein 22.3 kDa confers protection against Clonorchis sinensis". ''Vaccine'' [http

A multi-subunit protein pigment complex embedded in thylakoid membranes, mediating the initial ligh

...nked to an antibody or antigen as a marker for the detection of a specific protein, especially an antigen or antibody.

...-protein interactions from sequence analysis, and the dynamics of mRNA and protein expression in gene circuits....Using tools from statistical mechanics and i

...o changes in the balance of oxidants and antioxidants in the milieu of the protein.

...lle]] in [[eukaryotic]] cells. The Golgi apparatus further modifies many [[protein]]s and [[lipid]]s from the [[endoplasmic reticulum]]. Afterwards, they get Through adding certain signal [[oligosaccharide]]s a protein can be tagged to be transported to a specific area of the cell.

A protein involved in [[coagulation]] of [[blood]], unique among coagulation factors

...''β-2 adrenergic receptors''', are [[cell surface receptor]]s of the [[G-protein-coupled receptor]] type that are in the [[sympathetic nervous system]]. Bet ...se-[[cyclic AMP]] primarily and also [[cyclic GMP]] which then activates [[protein kinase]]s.

{{r|C-reactive protein}} {{r|Protein}}

...codes vitamin K epoxide reductase complex subunit-1, a small transmembrane protein of the endoplasmic reticulum." Promoter polymorphism may cause [[warfarin]]

...of their "currency", ATP ([[adenosine triphoshate]]), for the building of protein (25 to 30%), the second most important expenditure is for pumping sodium ou ...he case of this protein, oxidative stress causes a loss of function of the protein. Diseases associated with oxidative stress will frequently be accompanied b

...pathways may be part of larger signal transduction pathways; for example, protein kinase activation is part of the platelet activation signal pathway."<ref>{ ...see [http://www.ncbi.nlm.nih.gov/books/bv.fcgi?highlight=receptor,kinase,G-protein-coupled&rid=mcb.figgrp.5742 figure]).<ref name="isbn0-7167-3136-3">{{cite b

A nerve protein with potential significance in a number of [[peripheral neuropathy|peripher

In [[medicine]] and [[biochemistry]], '''apolipoproteins''' are "[[protein]] components on the surface of [[lipoprotein]]s. They form a layer surround * [[Apolipoprotein A]] (apo A) is the structural protein of [[high density lipoprotein]]s (alpha-lipoproteins).

...sponses to the [[redox state]] of the surroundings, in that the changes in protein function trigger relevant responses to the given redox state. ...crease the stability of these bonds (without denaturating irreversibly the protein).

...[[insulin]], and [[oxytocin]] and it has been found to activate specific [[protein kinase]]s."<ref>{{MeSH}}</ref> ...see [http://www.ncbi.nlm.nih.gov/books/bv.fcgi?highlight=receptor,kinase,G-protein-coupled&rid=mcb.figgrp.5742 figure]).<ref name="isbn0-7167-3136-3">{{cite b

...ear [[DNA]] [[molecules]] in [[polymer|complex]] with a large variety of [[protein]]s, such as [[histone]]s, to form [[chromosome]]s.

..., [[insulin]], and [[oxytocin]] and it has been found to activate specific protein [[kinase]]s.<noinclude>{{DefMeSH}}</noinclude>

...ctivated by foreign proteins of bacteria and other microorganisms, produce protein variants that variously open holes in the cell wall of invaders, and also [

...ab}}an "antibody that blocks receptors for epidermal growth factor (Entrez protein); approved for advanced colon cancer".[8] {{r|Edrecolomab}}is monclonal antibody against EpCAM (Entrez protein). Edrecolomab is a "anticolorectal carcinoma antibody for treatment of adva

In [[coagulation]], '''thromboplastin''' is a "constituent composed of [[protein]] and [[phospholipid]] that is widely distributed in many tissues. It serve

...[oxazolidinone]]-based [[medication]] that is a cholesteryl ester transfer protein inhibitor that raises [[HDL cholesterol]] and reduces [[LDL cholesterol]].< ...journal| author=Mason D | title= Anacetrapib, a cholesterol ester transfer protein (CETP) inhibitor for the treatment of atherosclrerosis | journal= Curr Opin

...ght|350px|A schematic presentation of the three branches of the [[unfolded protein response]], their [[signaling pathway]]s, and pathological responses with r

The serine/threonine protein kinase B (PKB) family or Akt is an important downstream signaling component

'''(2)''' Brehm B.J., D'Alessio D.A. (2008) Benefits of high-protein weight loss diets: enough evidence for practice? Curr Opin Endocrinol Diabe '''(3)''' Halton T.L., Hu F.B. (2004) The Effects of High Protein Diets on Thermogenesis, Satiety and Weight Loss: A Critical Review. J Am Co

...evels, which make it suitable for specialty breads and blending with lower protein wheat. It is mainly traded at the [[Minneapolis Grain Exchange]]. ...for bread, hard baked goods and as an adjunct in other flours to increase protein in pastry flour for pie crusts. Some brands of unbleached all-purpose flour

Highly conserved nuclear RNA-protein complexes that function in RNA processing in the nucleus, including pre-mRN

In [[genetics]], '''translation''' is the production of [[protein]]s in living cells. The process relies on the use of [[RNA molecule]]s as t

enzyme or trans-membrane protein existing in the cellular membrane of Halobacterium Salinarium and acting as

'''Protein C''' is a "[[vitamin K|vitamin-K]] dependent zymogen present in the blood,

'''Hemeproteins''' are "[[protein]]s that contain an iron-[[porphyrin]], or [[heme]], prosthetic group resemb

...the '''Western blot''' is an [[immunoassay]] for the "identification of [[protein]]s or peptides that have been electrophoretically separated by blot transfe

A preparation of a simple protein, which combines with [[heparin]] to form a stable inactive complex; it is

..., '''HER-2''', '''HER2/neu''') is a [[cell surface receptor]] that is a "[[protein-tyrosine kinase receptor]] that is found to be overexpressed in a significa The ErbB-2 gene is located on chromosome 17q21 and encodes a protein of 1255 amino acids which weighs, when glycosylated, 185 kDa. The human Erb

...and cloves. Sugar is added for sweetness while egg and milk add liquid and protein. Pumpkin pie is normally served at [[Thanksgiving]].

* [http://www.ncbi.nlm.nih.gov/sites/entrez?db=protein&term=NP_690605 Entrez protein]

...pmid11114734">{{cite journal |author=Robinson DR, Wu YM, Lin SF |title=The protein tyrosine kinase family of the human genome |journal=Oncogene |volume=19 |is # [[G-protein-coupled receptor]]. Examples include [[adrenergic receptor]]s, [[angiotensi

'''Peptide YY''' (PYY) is a short (36-amino acid) [[protein]] released by L-cells in the mucosa of the ileum and colon in response to f

...hobic]] is found almost exclusively buried within hydrophobic patches in [[protein structure]]s. When [[aspartame]] was first introduced (as Nutrisweet) it c

{{Image|ProteinRibbonByDEVolk.jpg|right|300px|Ribbon diagram of the P13 protein}} ...s (sicle cell anemia, cancer) resulting from DNA changes or by incorrect [[protein folding]] (alzheimer's).

* Residue is another name for an [[amino acid]] in a protein. One might say that "residue 39 is a [[cysteine]]".

{{r|Protein}}

{{r|Protein}}

...s. In [[cell (biology)|cells]], it is primarily involved the creation of [[protein|proteins]] based the [[genetic code]] stored in [[DNA]]. The primary diffe ...he [[ribosome]], where its [[genetic code|sequence]] is read to create a [[protein]].

{{r|protein}}

...t of the twenty common [[amino acid]]s used by living organisms to build [[protein]]s. It is one of the non-polar amino acids. The ''side chain'' of alanine

...]] regulation, energy balance and the regulation of body weight. It is a G-protein coupled receptor, densely expressed in appetite-regulating regions of the h

<noinclude>{{Subpages}}</noinclude>"Antibodies from non-human species whose protein sequences have been modified to make them nearly identical with human antib

{{r|Protein}}

{{r|Green fluorescent protein}} {{r|Protein purification}}

{{r|Protein}}

...t of the twenty common [[amino acid]]s used by living organisms to build [[protein]]s. The ''[[side chain]]'', or ''[[residual group]]'' of glycine is a hydr

{{r|Protein NMR spectroscopy||***}} {{r|Solid-state protein NMR spectroscopy||***}}

[[Recombinant protein]]s are "proteins prepared by recombinant DNA technology."<ref>{{MeSH|Recomb

{{r|penicillin-binding protein}}

...e of the twenty common [[amino acid]]s used by living organisms to build [[protein]]s. It is one of the aliphatic, non-polar, [[hydrophobic]] amino acids, an

*[http://thepathologicalprotein.com/ The Pathological Protein - Mad Cow, Chronic Wasting, and Other Deadly Prion Diseases] (2003, updated

...often ends [[secondary structure]] elements in proteins and forms turns in protein structures. It is aliphatic, cyclic and nonpolar. It is the only amino ac

...esponse, amplify or modulate the response, and start a chain of complement protein conversions that result in proteins that attack cell membrates. [[Image:Com ...mplement protein number; there may be suffixes to describe subclasses of a protein. Regulatory factor or enzymes are other proteins involved in the process, s

...pes I and II are due to insufficient activity of [[complement C1 inhibitor protein]] (C1 esterase inhibitor).<ref>Hereditary angioedema. ({{OMIM|106100}})</re ...midlookup?view=long&pmid=10644276 |issn=}}</ref> [[complement C1 inhibitor protein]] antigen is low in type I and normal in type II.

{{r|Protein structure}} {{r|Protein}}

...on <math>\alpha</math>-[[amino acid]]s used by living organisms to build [[protein]]s. It is one of the four [[aromatic]] amino acids along with [[phenylalan

...It deals with the structure and function of cellular components, such as [[protein]]s, [[carbohydrate]]s, [[lipid]]s, [[nucleic acid]]s, and other [[Biology|b ===Protein===

...l.| title=Agreement between erythrocyte sedimentation rate and C-reactive protein in hospital practice. | journal=Am J Med | year= 2010 | volume= 123 | issu

{{r|protein}}

Dopamine uptake inhibitors act on [[dopamine plasma membrane transport protein]]s.

...gical pathways analysis, querying and visualization of gene regulation and protein interaction networks, metabolic and signaling pathways." A tool for biologi

{{r|Protein structure}} {{r|Protein}}

The angiotensin receptors are G protein-coupled [[cell surface receptor]]s responsible for the [[signal transductio {{protein