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CZ:Biology Workgroup

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The Citizendium Biology Workgroup
Biology article All articles To Approve Approved Draft Editors Status
(Userinfo System)
Forum
Recent changes Recent changes Authors Mailing list:
cz-biology
Checklist-generated categories: Developed [1] | Developing [2] | Stub [3] | External [4]
| Advanced [0-1] | Nonstub [0-2] | Internal [0-3] | Underlinked | Cat Check | Cleanup
Biology workgroup tasks
Suggestions for this page as recommended by Larry Sanger

Still to do:

(i) a welcome message aimed at new editors in your area, and perhaps

(ii) a link to a version of Citizendium_Pilot:Recruitment_Letter adapted for your discipline. And whatever else seems helpful!

The most up to date version of the recruitment letter can been seen here.

Contents

How you can help
Launch workgroup tagging of articles

Any article related to the Biology Workgroup should be placed in the category [[Category:Biology Workgroup]]". This means that we think the biology workgroup will be one of the main groups to manage this article. Note, the tag is *not* "[[Category:Biology]]"; that's because we're attaching the article to its *management*.

Note: only articles with the biology workgroup category tag will been seen in the recent changes for all biology articles (see header above).

Launch area management: deferred We should probably defer selection of discipline workgroup management until after more people in each area have arrived, and we have had a chance to finalize how this management will be selected.

Proposed subgroups

The organisation we inherited from Wikipedia is subdivided into disciplines within biology, however, we do not have to follow such a format. We can move forward with subgroups that seem more natural, and I imagine some subgroups will include several related disciplines. We can discuss this more on the subgroups thread, in the biology forum, as we reach a critical mass of editors and authors.

Relevant lists and headers from Wikipedia are shown at the bottom of this section. Also, the list of high priority articles in the next section are currently categorized by discipline.


List of biology disciplines

General subfields within biology
Anatomy | Astrobiology | Biochemistry | Bioinformatics | Botany | Cell biology | Ecology | Developmental biology | Evolutionary biology | Genetics | Genomics | Marine biology | Human biology | Microbiology | Molecular biology | Origin of life | Paleontology | Parasitology | Pathology | Physiology | Taxonomy | Zoology

Help plan Biology Week!

Go here and sign up!

High priority articles

This list of articles is not complete but it can be used as a starting point for writing new articles or focus our efforts towards getting more articles approved. Articles in bold are regarded as a higher priority. Those struck through are considered as low priority.

Biography

  1.  Charles Darwin
  2. Bernard Katz
  3. Carolus Linnaeus -
  4.  Antonie van Leeuwenhoek
  5. Gregor Mendel
  6.  Barbara_McClintock - 'approved
  7.  Alfred Russel Wallace
  8.  J. B. S. Haldane

 Anatomy

  1.  Circulatory system
    1. Blood
    2. Heart
  2. Endocrine system
  3. Gastrointestinal tract
    1. Large intestine
    2. Small intestine
    3. Liver
  4. Integumentary system
    1. Breast
    2.  Skin
  5.  Nervous system
    1.  Brain
    2. Spinal Cord
    3. Peripheral Nervous System
  6. Sensory system
    1. Auditory system
      1.  Ear
    2. Gustatory system
    3. Olfactory system
      1.  Nose
    4. Somatosensory system
    5. Visual system
      1. Eye
  7. Reproductive system
    1. Penis
    2. Vagina
  8. Respiratory system
    1. Lung
  9. Skeleton

 Biochemistry

  1. Macromolecules
    1. Nucleic acid
      1.  DNA
      2.  RNA
    2.  Protein
      1.  Enzyme
      2.  Amino acid
      3. Peptide
    3. Carbohydrate
    4.  Lipid
  2.  Metabolism - approved
    1.  Glycolysis
      1. NAD
    2. Krebs cycle
      1. FAD
    3. Electron transport chain
    4. Photosynthesis
    5. Intermediary metabolism


 Biophysics

  1. Biofilms
  2.  Biomechanics
    1. Molecular motor
    2. Muscle
    3. Organogenesis
  3. Bionics
  4. Biomineralisation
    1.  Fossil
    2. Skeleton
  5. Biophysical techniques
    1. Confocal microscopy
    2. CT
    3. Dielectric spectroscopy
    4. EEG
    5. Infrared spectroscopy
    6. MEG
    7. MRI
    8.  NMR spectroscopy
    9. Optical tweezers
    10. Patch clamp
    11. PET
    12. TMS
    13. Ultrasound
  1. Cell
    1.  Cell membrane
      1. Ion channel
      2. Membrane potential
      3. Phospholipid
    2. Cell metabolism
      1. Kinetics
      2. Metabolic Control Theory
    3. Cell signalling
      1. Cell differentiation
      2. Immune system
    4. Cell migration
  2. Cryoptobiology
    1.  Cryobiology
      1.  Cryopreservation
      2. Cold hardiness
    2. Dehydration
  3. Homeostasis
  4. Radiobiology
  5. Signal transduction
    1. Cell signalling
    2. Hormones
    3.  Nervous system
    4. Sensory system
  6.  Systems biology
  7. Theoretical biology
  8.  Thermodynamics

Botany

  1.  Fungus
    1. Yeast
  2. Plant
    1. Angiosperm
      1. Eudicotyledon
        1. Arabidopsis thaliana
        2. Tobacco
        3. Oak
      2. Monocotyledon
        1.  Maize
        2. Rice
        3.  Barley
    2. Bryophyte
      1. Liverwort
      2. Moss
    3.  Fern
    4. Gymnosperm
  3. Plant anatomy
    1. Leaf
    2.  Flower
      1. Petal
    3. Root
    4. Stem
    5. Plant tissues
      1. parenchyma
      2. collenchyma
      3. sclerenchyma
      4. epidermis
        1. guard cell
        2. stomate (plural: stomata)
        3. trichome
        4. root hair
      5. xylem article could merge together the subcategories
        1. vessel element
        2. tracheid
      6. phloem article could merge together the subcategories
        1. sieve tube cell
        2. companion cell
  4. Plant physiology
    1. Dehiscence
    2. Flower induction
    3. Nitrogen assimilation
    4. Plant senescence
    5. Wilting
      1. Plasmolysis
    6. Plant hormones
      1. Abscisic acid
      2. Auxin
      3. Brassinosteroid
      4. Cytokinin
      5. Ethylene
      6. Gibberellin
  5. Plant behavior
    1. Gravitropism
    2. Heliotropism
    3. Phototropism
    4. Thigmotropism

Cell biology

  1. Cell
  2. Cell division
  3. Cell nucleus
  4. Cell wall
  5.  Cell membrane
  6. Cytoplasm
  7.  Cytoskeleton
  8. Flagellum
  9. Organelles
    1. Chloroplast
    2.  Mitochondrion
    3. Endoplasmic reticulum
    4.  Golgi apparatus
    5. Vacuole
    6. Ribosome

Developmental biology

  1. Cellular differentiation
  2. Stem Cells
  3.  Cancer
  4. Descriptive embryology

 Ecology

  1.  Habitat
  2.  Population
  3.  Metapopulation
  4.  Community (ecology)
  5.  Ecosystem
  6.  Landscape
  7.  Biome
  8.  Species
  9.  Biodiversity
  10.  Biogeography
    1.  Island Biogeography
  11. Biological dispersal
  12.  Ecological succession
  13.  Symbiosis
  14.  Food web

 Evolutionary biology

  1.  Evolution
    1. Evidence of evolution
    2. macroevolution
    3. microevolution
  2.  Natural selection
  3.  Gene flow
  4.  Adaptation
  5. Speciation
  6. EvoDevo

 Genetics

  1. Classical genetics
    1. Mendelian inheritance
    2.  mutation
  2. Clinical genetics
    1.  Genetic counseling
  3. Ecological genetics
  4. Molecular genetics
  5. Population genetics
    1. selection
    2. genetic drift
    3.  gene flow
  6. Quantitative genetics

Microanatomy / Histology

  1. Gland

 Microbiology

  1.  Archaea
  2.  Bacteria

Molecular biology

  1.  Polymerase chain reaction
  2. Gel electrophoresis
  3.  Southern blot
  4. Northern blot
  5. Restriction enzyme
  6. Western blot

Neuroscience

  1.  Brain
  2. Spinal cord
  3. Intelligence
  4.  Neuron
  5. Neural development
  6.  Neuroanatomy
  7. Neurochemistry

 Physiology

  1. Digestion
  2. Excretion
  3. Biological reproduction
  4.  Hormone
    1. Pregnancy
    2. Asexual reproduction
    3. Sexual reproduction
  5. Respiration (physiology)


Taxonomy

  1. Cladistics
  2.  Systematics
  3. Tree of life

 Virology

  1.  Bacteriophage
  2. DNA virus
  3. RNA virus
  4. Viral diseases
    1.  AIDS
    2.  SARS
    3. Chicken Pox & Shingles (Varicella)

Zoology

  1.  Protist
  2.  Animal
    1. Arthropod
      1.  Insect
        1. Ant
        2.  Bee
        3. Beetle
        4. Butterfly
      2. Arachnid
    2. Chordate
      1. Amphibian
        1. Frog
      2. Fish
        1. Shark
      3.  Mammal
        1.  Ape
          1.  Human
        2. Bat
        3. Bear
        4. Camel
        5.  Cat
        6. Cattle
        7. The Dog Family
          1. Wolves
          2. Grey Wolf
        8. Dolphin
        9. Elephant
          1. Mammoth
        10.  Horse
        11. Sheep
        12. Lion
        13. Pig
        14. Whale
      4. Reptile
        1. Dinosaur
          1.  Bird
            1. Eagle
            2. Duck
            3. Chicken
            4.  Owl
            5. Dove
            6.  Turkey
            7. Ostrich
            8.  Penguin
        2.  Snake

Core article

The list below is adapted from the high priority articles above and the small list that has already started at CZ:Core_Articles#Biology. These are articles that we deem vital to get the biology section going. Please add and delete from this list. We are restricted to 198 articles that we think are needed now.

For a more comprehensive list search for the red links in the CZ:Biology_Workgroup/list or CZ:Biology_Workgroup/concepts.

Just to clarify, I combined the list the concepts and the core article we already had. I then edited for duplicates and removed items that did not seem to fit the core concept. We now have 300 articles. Feel free to add topics that are missing. Also feel free to group articles into topic related concepts, although this alphabetical list is probably OK for those wanting to see what is missing from CZ. Chris Day (talk) 16:33, 27 September 2007 (CDT)

Lower priority

Approved
Developed
Developing
Stubs
acid
Biochemistry
carnivore
glucose
mass extinction
Southern blot
Systematics
External
No Article: abiogenesis • acetyl CoA • activation energy • adaptive landscapes • aerobic • autotroph • biological emergence • blastula • Botany • carotenoid • Cellular differentiation • Chi square test • chitin • Cladistics • Classical genetics • conformation • decomposer • Developmental biology • diffusion • dimer • DNA sequencing • epistasis • Ethology • Excretion • FADH2 • gene pool • Genomics • Hershey-Chase experiment • housekeeping gene • hybrid • knock-out mouse • limnology • mass spectrometry • Molecular biology • niche • Nicotinamide adenine dinucleotide • non-competitive inhibition • nucleosome • peroxisome • phospholipid • pigment • Plant physiology • Plant tissues • plastid • primary structure • proteomics • punctuated equilibrium • purine • pyrimidine • quaternary structure • secondary structure • taxis • Taxonomy • tertiary structure • twin • xanthophyll • Zoology • 

A redirect or no subpages format: Cell biology • 

Biographies

We may already have some of these under different spellings or without the middle name.

Approved
Developed
Developing
Alfred Russel Wallace
Stubs
External
No Article: Ernst Haeckel • Francis Crick • Melvin Calvin • Hans Krebs • Fred Sanger • Linus Pauling • James Watson • Jean-Baptiste Lamarck • Konrad Lorenz • Max Delbrück • Oswald T. Avery • Comte de Buffon • 

A redirect or no subpages format:

Organisms

Approved
Developed
Developing
Stubs
Escherichia coli
human
External
No Article: algae • Ant • Arabidopsis thaliana • Bryophyte • DNA virus • eubacteria • fungi • neurospora crassa • plant • retrovirus • RNA virus • 

A redirect or no subpages format: archaebacteria • 

Already have these

Move these to the first column if they need a lot of work.

Approved
DNA
Life
Developed
Antonie_van_Leeuwenhoek
bacteria
Lipid
marine biology
microbiology
organism
pollination
systems biology
transposon
Vasopressin
Developing
acetylcholine
amino acid
anabolism
Anatomy
Bioinformatics
cancer
catabolism
cell (biology)
Charles Darwin
circulatory system
cloning
Ecology
endosymbiotic theory
Evolution
flower
Genetics
histone
kidney
mutation
natural selection
Physiology
Protein
species
stem cell
Stubs
animal
hormone
insulin
microfilament
nervous system
wood
x-ray diffraction
External
Alexander Fleming
biotechnology
Cellular respiration
citric acid cycle
cytoskeleton
dihybrid cross
enzyme
fermentation (biochemistry)
genotype
glycogen
insect
neurotransmitter
prion
synapse
No Article:

A redirect or no subpages format: macromolecule • plasma membrane • 


Bear in mind the Health Sciences Workgroup has 198, too, and there must not be overlap. --Larry Sanger 12:02, 27 September 2007 (CDT)

Also note that the red links on the "already have" list are articles that are marked as externally sourced. These may be included at CZ:Core Articles to be rewritten.--Joe Quick (Talk) 18:53, 27 September 2007 (CDT)

Tree-of-life subgroup

A major part of the articles in the biology workgroup can be categorized under the concept of Tree of Life. All article about a species, genus or any other taxonomic level are part of this subgroup.

Naming convention

For others to decide

Taxoboxes

Taxoboxes facilitate the navigation through the Tree-of-Life and each taxon is required to have one using the Template:Taxobox.

Major topics from wikipedia biology portal

General Life | species | biology
Ecology Biomass | food chain | indicator species | extinction | habitat | species distribution | Gaia theory
Conservation Biodiversity | biodiversity hotspot | nature reserve | edge effect | Allee effect | corridor | fragmentation | pollution | invasive species | in situ - ex situ | seedbank | environmental economics
Evolution Natural selection | genetic drift | sexual selection | speciation | mutation | gene flow
Tree of life Animals | plants | fungi | protists | bacteria | archaea | prokaryote | eukaryote | three-domain system | angiosperms | insects | nematodes | viruses
Development Tissues | fertilization | embryogenesis | gastrulation | neurulation | organogenesis | differentiation | morphogenesis | metamorphosis | ontogeny
Life cycle reproduction | ploidy | spermatogenesis | alternation of generations | oogenesis | parasitism | evolution of sex | meiosis | DNA replication
The cell Cell wall | cell membrane | cytoskeleton | mitochondrion | chloroplast | nucleus | endoplasmic reticulum | Golgi apparatus | cell cycle | mitosis | metabolism | cell signaling | protein targeting
Biochemistry DNA | RNA | protein | enzyme | protein folding | carbohydrate | lipid | glycolysis | citric acid cycle | electron transport chain | oxidative phosphorylation | photosynthesis | protein structure
Genetics Gene | genome | karyotype | transcription | translation | recombination | chromosome | Mendelian inheritance | phenotype | genotype | epigenetics | splicing | mutation | genetic fingerprint | chromatin | classical genetics | ecological genetics | molecular genetics | population genetics | quantitative genetics
Techniques Genetic engineering | transformation | gel electrophoresis | chromatography | centrifugation | cell culture | DNA sequencing | DNA microarray | green flourescent protein | vector | Enzyme assay | Protein purification | Western blot | Northern blot | Southern blot | restriction enzyme | polymerase chain reaction | two-hybrid screening
Other fields Anatomy | astrobiology | botany | bioengineering | bioinformatics | human biology | microbiology | origin of life | paleontology | parasitology | pathology | pharmacology | phylogenetics | physiology | marine biology | systems biology | taxonomy | zoology
Classification of man Primate | mammal | vertebrate | craniata | chordate | deuterostome | animal
History of biology Natural history | geography | ecology | molecular biology | evolutionary biology | Great Chain of Being
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